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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9680618 chr22:29566978 C/T ANKRD54 chr22:38226862-38245334:- -0.37 -5.93 5.9E-9 Box Plot
THCA rs9680618 chr22:29566978 C/T ATXN10 chr22:46067678-46241187:+ -0.42 -6 3.96E-9 Box Plot
THCA rs9680618 chr22:29566978 C/T CBY1 chr22:39052641-39069859:+ -0.41 -6.48 2.35E-10 Box Plot
THCA rs9680618 chr22:29566978 C/T CYTSA chr22:24666786-24813707:+ -0.36 -6.55 1.47E-10 Box Plot
THCA rs9680618 chr22:29566978 C/T EP300 chr22:41487790-41576083:+ -0.3 -5.91 6.54E-9 Box Plot
THCA rs9680618 chr22:29566978 C/T GGA1 chr22:38004482-38029571:+ -0.4 -6 3.98E-9 Box Plot
THCA rs9680618 chr22:29566978 C/T NOL12 chr22:38077680-38089485:+ -0.34 -6.36 4.82E-10 Box Plot
THCA rs9680618 chr22:29566978 C/T POLDIP3 chr22:42979727-43010968:- -0.4 -6.16 1.55E-9 Box Plot
THCA rs9680618 chr22:29566978 C/T PPIL2 chr22:22020298-22054304:+ -0.42 -6.1 2.21E-9 Box Plot
THCA rs9680618 chr22:29566978 C/T RBX1 chr22:41347351-41369313:+ -0.32 -6.28 7.4E-10 Box Plot
THCA rs9680618 chr22:29566978 C/T SAMM50 chr22:44351301-44406411:+ -0.41 -6.29 7.04E-10 Box Plot
THCA rs9680618 chr22:29566978 C/T SELO chr22:50639408-50656045:+ -0.33 -6.09 2.37E-9 Box Plot
THCA rs9680618 chr22:29566978 C/T SLC2A11 chr22:24198890-24228496:+ -0.48 -5.9 6.87E-9 Box Plot
THCA rs9680618 chr22:29566978 C/T SMCR7L chr22:39896105-39914136:+ -0.37 -5.89 7.27E-9 Box Plot
THCA rs9680618 chr22:29566978 C/T TUG1 chr22:31366663-31375381:+ -0.43 -6.54 1.59E-10 Box Plot